# Trichodesmium accessions # S. Dyhrman (LDEO) # version: 2017-10-27 # scroll right for NCBI accession links; NAd' mes 'not applicable', 'nd' means no data # ========================= biomaterial_provider collected_by bioproject_accession cruise_id cruise_name ------------------------- Dyhrman Lab, Columbia University Dyhrman Lab, Columbia University PRJNA314461 KM0703 SPAK ========================= sample_name sample_title organism strain isolate host isolation_source collection_date geo_loc_name sample_type depth env_biome genotype lat lon passage_history samp_size NCBI_accession_link ------------------------- SPAK11R Miseq of Trichodesmium sp: SPAK11R Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -27.41 162.01 NA ~10-15 colonies PRJNA314461 SPAK11P Miseq of Trichodesmium sp: SPAK11P Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -27.41 162.01 NA ~10-15 colonies PRJNA314461 SPAK13R Miseq of Trichodesmium sp: SPAK13R Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -23.03 166.13 NA ~10-15 colonies PRJNA314461 SPAK13P Miseq of Trichodesmium sp: SPAK13P Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -23.03 166.13 NA ~10-15 colonies PRJNA314461 SPAK23P Miseq of Trichodesmium sp: SPAK23P Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -14.59 177.29 NA ~10-15 colonies PRJNA314461 SPAK24R Miseq of Trichodesmium sp: SPAK24R Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -14.59 178.44 NA ~10-15 colonies PRJNA314461 SPAK24P Miseq of Trichodesmium sp: SPAK24P Trichodesmium holobiont NA NA NA South Pacific Subtropical Gyre March 2007 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA -14.59 178.44 NA ~10-15 colonies PRJNA314461 ========================= biomaterial_provider collected_by bioproject_accession cruise_id cruise_name ------------------------- Dyhrman Lab, Columbia University Dyhrman Lab, Columbia University PRJNA314461 AE0810 X0804 ========================= sample_name sample_title organism strain isolate host isolation_source collection_date geo_loc_name sample_type depth env_biome genotype lat lon passage_history samp_size NCBI_accession_link ------------------------- X80412R Miseq of Trichodesmium sp: X80412R Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 19.39 -62.3 NA ~10-15 colonies PRJNA314461 X80412P Miseq of Trichodesmium sp: X80412P Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 19.39 -62.3 NA ~10-15 colonies PRJNA314461 X80419R Miseq of Trichodesmium sp: X80419R Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 19.4 -51.4 NA ~10-15 colonies PRJNA314461 X80419P Miseq of Trichodesmium sp: X80419P Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 19.4 -51.4 NA ~10-15 colonies PRJNA314461 X80424R Miseq of Trichodesmium sp: X80424R Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 19.4 -44.45 NA ~10-15 colonies PRJNA314461 X80424P Miseq of Trichodesmium sp: X80424P Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 19.4 -44.45 NA ~10-15 colonies PRJNA314461 X80429R Miseq of Trichodesmium sp: X80429R Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 24.09 -65.18 NA ~10-15 colonies PRJNA314461 X80429P Miseq of Trichodesmium sp: X80429P Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 24.09 -65.18 NA ~10-15 colonies PRJNA314461 X8047R Miseq of Trichodesmium sp: X8047R Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 23.35 -50.53 NA ~10-15 colonies PRJNA314461 X8047P Miseq of Trichodesmium sp: X8047P Trichodesmium holobiont NA NA NA North Atlantic Subtropical Gyre May 2008 Atlantic Ocean Environmental ~15 m tropical/subtropical open ocean NA 23.35 -50.53 NA ~10-15 colonies PRJNA314461 ========================= biomaterial_provider collected_by bioproject_accession cruise_id cruise_name ------------------------- Dyhrman Lab, Columbia University Dyhrman Lab, Columbia University PRJNA314461 KM1309 PhoRII ========================= sample_name sample_title organism strain isolate host isolation_source collection_date geo_loc_name sample_type depth env_biome genotype lat lon passage_history samp_size NCBI_accession_link ------------------------- PHORII20R Miseq of Trichodesmium sp: PHORII20R Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII20P Miseq of Trichodesmium sp: PHORII20P Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII21R Miseq of Trichodesmium sp: PHORII21R Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII21P Miseq of Trichodesmium sp: PHORII21P Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII24R Miseq of Trichodesmium sp: PHORII24R Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII24P Miseq of Trichodesmium sp: PHORII24P Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII25R Miseq of Trichodesmium sp: PHORII25R Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII25P Miseq of Trichodesmium sp: PHORII25P Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII26R Miseq of Trichodesmium sp: PHORII26R Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 PHORII26P Miseq of Trichodesmium sp: PHORII26P Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre August 2013 Pacific Ocean Environmental ~15 m tropical/subtropical open ocean NA 22.066 -158.284 NA ~10-15 colonies PRJNA314461 ========================= biomaterial_provider collected_by bioproject_accession cruise_id cruise_name ------------------------- Dyhrman Lab, Columbia University Dyhrman Lab, Columbia University PRJNA330990 AE1409 PABST ========================= sample_name sample_title organism strain isolate host isolation_source collection_date geo_loc_name sample_type depth env_biome genotype lat lon passage_history samp_size NCBI_accession_link ------------------------- SK021 North Atlantic Trichodesmium Holobiont Station 2 Trichodesmium holobiont NA NA NA Sargasso Sea 2014-05 Atlantic Ocean Environmental 15 m tropical/subtropical open ocean NA 11.86 59.44 NA ~25 colonies PRJNA330990 SK022 North Atlantic Trichodesmium Holobiont Station 5 Trichodesmium holobiont NA NA NA Sargasso Sea 2014-05 Atlantic Ocean Environmental 15 m tropical/subtropical open ocean NA 11.86 59.44 NA ~25 colonies PRJNA330990 SK023 North Atlantic Trichodesmium Holobiont Station 9 Trichodesmium holobiont NA NA NA Sargasso Sea 2014-05 Atlantic Ocean Environmental 15 m tropical/subtropical open ocean NA 11.86 59.44 NA ~25 colonies PRJNA330990 SK024 North Atlantic Trichodesmium Holobiont Station 10 Trichodesmium holobiont NA NA NA Sargasso Sea 2014-05 Atlantic Ocean Environmental 15 m tropical/subtropical open ocean NA 11.86 59.44 NA ~25 colonies PRJNA330990 SK025 North Atlantic Trichodesmium Holobiont Station 16 Trichodesmium holobiont NA NA NA Sargasso Sea 2014-05 Atlantic Ocean Environmental 15 m tropical/subtropical open ocean NA 11.86 59.44 NA ~25 colonies PRJNA330990 SK026 North Atlantic Trichodesmium Holobiont Station 17 Trichodesmium holobiont NA NA NA Sargasso Sea 2014-05 Atlantic Ocean Environmental 15 m tropical/subtropical open ocean NA 11.86 59.44 NA ~25 colonies PRJNA330990 ========================= biomaterial_provider collected_by bioproject_accession cruise_id cruise_name ------------------------- Dyhrman Lab, Columbia University Dyhrman Lab, Columbia University PRJNA381915 KM1513 SCOPE ========================= sample_name sample_title organism strain isolate host isolation_source collection_date geo_loc_name sample_type depth env_biome genotype lat lon passage_history samp_size NCBI_accession_link ------------------------- Tricho_diel_1 tricho_diel_1_0913 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-27 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_2 tricho_diel_2_1326 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-27 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_3 tricho_diel_3_1737 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-27 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_4 tricho_diel_4_2119 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-27 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_5 tricho_diel_5_0117 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-28 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_6 tricho_diel_6_0512 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-28 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_7 tricho_diel_7_0912 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-28 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_8 tricho_diel_8_1312 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-28 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_9 tricho_diel_9_1715 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-28 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_10 tricho_diel_10_2155 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-28 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_11 tricho_diel_11_0137 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-29 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_12 tricho_diel_12_0515 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-29 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_13 tricho_diel_13_0915 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-29 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_14 tricho_diel_14_1313 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-29 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_15 tricho_diel_15_1719 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-29 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915 Tricho_diel_16 tricho_diel_16_2124 Trichodesmium holobiont NA NA NA North Pacific Subtropical Gyre 2015-07-29 Pacific Ocean Environmental 15 m tropical/subtropical open ocean NA 24.5 156 NA ~3-10 colonies PRJNA381915